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Exclude Indexes, Relationships, SQL from SQL Server Database output file

I am in the process of creating functional database documentation intended to describe the usage of tables and columns. The audience does not need to see Indexes, Relationships, Objects that <table> Depends On, SQL, or See also sections for each of the tables. Is there any way to exclude these from being included in the output file? My preference is to keep them in the Content File, but just exclude them from the generated .chm file. Any suggestions for manipulating the output once generated would also be welcome.

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